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@PennLINC

Lifespan Informatics and Neuroimaging Center

The Lifespan Informatics and Neuroimaging Center at the University of Pennylvannia
README.md

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  1. qsiprep qsiprep Public

    Preprocessing of diffusion MRI

    Python 178 62

  2. qsirecon qsirecon Public

    Reconstruction of preprocessed q-space images (dMRI)

    Python 21 17

  3. aslprep aslprep Public

    Preprocessing of arterial spin labeling (ASL) data

    Python 54 19

  4. xcp_d xcp_d Public

    Post-processing of fMRIPrep, NiBabies, and HCP outputs

    Python 108 35

  5. CuBIDS CuBIDS Public

    Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.

    Python 30 13

  6. babs babs Public

    BIDS App Bootstrap (BABS)

    Python 12 7

Repositories

Showing 10 of 215 repositories
  • aslprep Public

    Preprocessing of arterial spin labeling (ASL) data

    PennLINC/aslprep’s past year of commit activity
    Python 54 19 43 6 Updated Mar 18, 2026
  • babs Public

    BIDS App Bootstrap (BABS)

    PennLINC/babs’s past year of commit activity
    Python 12 MIT 7 41 4 Updated Mar 18, 2026
  • sypres-docs Public
    PennLINC/sypres-docs’s past year of commit activity
    HTML 0 MIT 0 3 6 Updated Mar 17, 2026
  • qsiprep Public

    Preprocessing of diffusion MRI

    PennLINC/qsiprep’s past year of commit activity
    Python 178 BSD-3-Clause 62 98 13 Updated Mar 17, 2026
  • qsirecon Public

    Reconstruction of preprocessed q-space images (dMRI)

    PennLINC/qsirecon’s past year of commit activity
    Python 21 BSD-3-Clause 17 79 10 Updated Mar 17, 2026
  • ANTs Public Forked from ANTsX/ANTs

    Advanced Normalization Tools (ANTs)

    PennLINC/ANTs’s past year of commit activity
    C++ 0 Apache-2.0 402 0 0 Updated Mar 17, 2026
  • ITK Public Forked from InsightSoftwareConsortium/ITK

    Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

    PennLINC/ITK’s past year of commit activity
    C++ 0 Apache-2.0 738 0 0 Updated Mar 17, 2026
  • xcp_d Public

    Post-processing of fMRIPrep, NiBabies, and HCP outputs

    PennLINC/xcp_d’s past year of commit activity
    Python 108 BSD-3-Clause 35 41 8 Updated Mar 16, 2026
  • mrtrix-trx-integration Public
    PennLINC/mrtrix-trx-integration’s past year of commit activity
    Shell 0 0 0 0 Updated Mar 16, 2026
  • nibs Public

    Myelin mapping test-retest study

    PennLINC/nibs’s past year of commit activity
    Jupyter Notebook 1 MIT 0 3 0 Updated Mar 16, 2026
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