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@SAFEHR-data

SAFEHR

Secure or Anonymised Framework for Electronic Health Records

Welcome to SAFEHR

SAFEHR (pronounced simply as safer) is our Secure/Anonymised Framework for Electronic Health Record data at UCLH. We're a partnership between UCL and UCLH supported and funded by the UCLH Biomedical Research Centre.

If you're interested in learning more, then please drop by the Institute of Health Informatics (IHI) at 222 Euston Road, or drop us an email.

We manage and maintain software to support health data reseearch.

  • EMAP: The Experimental Medicine Application Platform (EMAP) produces a near real-time database containing clinical data for research and dashboard development within UCLH.
  • PIXL is a system for extracting, linking and de-identifying DICOM imaging data, structured EHR data and free-text data from radiology reports at UCLH.
  • FlowEHR is an open-source platform for iterative, safe & reproducible development & deployment of data science solutions inside the NHS.

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  1. FlowEHR FlowEHR Public template

    FlowEHR is a safe, secure & cloud-native development & deployment platform for digital healthcare research & innovation.

    HCL 16 12

  2. PIXL PIXL Public

    PIXL Image eXtraction Laboratory

    Python 8 2

  3. emap emap Public

    Near real-time clinical database for research and innovation

    Java 4 2

  4. starter-guide starter-guide Public

    Starter guide for working with SAFEHR-data

    Jupyter Notebook 1

Repositories

Showing 10 of 49 repositories
  • PIXL Public

    PIXL Image eXtraction Laboratory

    SAFEHR-data/PIXL’s past year of commit activity
    Python 8 Apache-2.0 2 43 4 Updated Feb 20, 2026
  • waveform-controller Public

    A controller for processing waveform messages on a rabbitmq queue

    SAFEHR-data/waveform-controller’s past year of commit activity
    Python 0 GPL-3.0 1 25 0 Updated Feb 20, 2026
  • emap Public

    Near real-time clinical database for research and innovation

    SAFEHR-data/emap’s past year of commit activity
    Java 4 2 48 8 Updated Feb 20, 2026
  • omop-carpentries Public

    Lesson on OMOP

    SAFEHR-data/omop-carpentries’s past year of commit activity
    R 1 1 9 0 Updated Feb 17, 2026
  • Satellite Public

    Synthetic EMAP star schema

    SAFEHR-data/Satellite’s past year of commit activity
    Python 4 Apache-2.0 3 0 0 Updated Feb 12, 2026
  • datafaker Public Forked from alan-turing-institute/sqlsynthgen

    Synthetic data for SQL databases

    SAFEHR-data/datafaker’s past year of commit activity
    Python 0 MIT 3 24 2 Updated Feb 12, 2026
  • book-of-radix Public
    SAFEHR-data/book-of-radix’s past year of commit activity
    0 0 0 0 Updated Feb 12, 2026
  • Radix-kerko Public

    Kerko (Zotero) app for the RADIX project

    SAFEHR-data/Radix-kerko’s past year of commit activity
    Shell 0 BSD-3-Clause 0 0 0 Updated Jan 31, 2026
  • omop-vocabs-processed Public

    Metadata for working with OMOP data at UCLH, e.g. vocabularies

    SAFEHR-data/omop-vocabs-processed’s past year of commit activity
    1 0 0 0 Updated Jan 21, 2026
  • Xhuma Public Forked from JMathiszig-Lee/GPconnect

    Test repo to connect up to NHS digital API's

    SAFEHR-data/Xhuma’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Jan 14, 2026