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Add a test for extremely long CIGARs in surject BAM output

Status: Open.

#4890 In vgteam/vg;

· adamnovak opened on Apr 28, 2026

Turn on recombination-awareness in Giraffe by default

Status: Open.

#4888 In vgteam/vg;

· adamnovak opened on Apr 23, 2026

Remove logic we no longer need for handling GFA input specially

Status: Open.

#4880 In vgteam/vg;

· adamnovak opened on Apr 21, 2026

terminate called after throwing an instance of 'std::runtime_error' what(): io::MessageEmitter::write: message too large

Status: Open.

#4878 In vgteam/vg;

· yanyew opened on Apr 16, 2026

vg giraffe v1.73.0 crash: "Trying to get the bounds of a root" during paired-end rescue

Status: Open.

#4875 In vgteam/vg;

· eabebe-tech opened on Apr 13, 2026

How to efficiently find SVTYPE when using vg deconstruct

Status: Open.

#4874 In vgteam/vg;

· ZhaoShuo0325 opened on Apr 11, 2026

Support for checkpointing or resumable vg autoindex or minimizer for large Giraffe indexes

Status: Open.

#4871 In vgteam/vg;

· eabebe-tech opened on Apr 7, 2026

Pruning with -u -M 32 still leads to GCSA indexing memory explosion (>1 TB) in spliced pantranscriptome graph

Status: Open.

#4869 In vgteam/vg;

· shin0727 opened on Apr 6, 2026

Different output between vg snarls and vg deconstruct -a

Status: Open.

#4867 In vgteam/vg;

· AliceLaurent opened on Apr 3, 2026

vg surject discards interchromosomal split-read evidence, making novel BND/translocation calling impossible from graph-aligned reads

Status: Open.

#4865 In vgteam/vg;

· Qaswara98 opened on Apr 1, 2026

Release vg v1.74.0

Status: Open.

#4859 In vgteam/vg;

· adamnovak opened on Mar 23, 2026

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v1.74.0

vg autoindex cannot handle compressed GFA

Status: Open.

#4856 In vgteam/vg;

· adamnovak opened on Mar 19, 2026